Common Name11-cis-retinal
Description11-cis-retinal is a retinal having 2E,4Z,6E,8E-double bond geometry. It has a role as a chromophore, a human metabolite and a mouse metabolite. It is a diterpene derived from the carotenoid vitamin A which functions as the active component of the visual cycle. It is the prosthetic group of rhodopsin. When stimulated by visible light, rhodopsin transforms this cis-isomer of retinal to the trans-isomer (11-trans-retinal). This transformation straightens-out the bend of the retinal molecule and causes a change in the shape of rhodopsin triggering the visual process. A series of energy-requiring enzyme-catalyzed reactions convert the 11-trans-retinal back to the cis-isomer. 11-cis-retinal functions in the retina in the transduction of light into the neural signals necessary for vision. 11-cis-retinal, while attached to opsin in rhodopsin is isomerized to all-trans-retinal by light. This is the event that triggers the nerve impulse to the brain which allows for the perception of light. All-trans-retinal is then released from opsin and reduced to all-trans-retinol. All-trans-retinol is isomerized to 11-cis-retinol in the dark, and then oxidized to 11-cis-retinal. 11-cis-retinal recombines with opsin to re-form rhodopsin. Night blindness or defective vision at low illumination results from a failure to resynthesize 11-cis retinal rapidly.
Structure
Molecular FormulaC20H28O
Average Mass284.43570
Monoisotopic Mass284.21402
IUPAC Name(2E,4Z,6E,8E)-3,7-dimethyl-9-(2,6,6-trimethylcyclohex-1-en-1-yl)nona-2,4,6,8-tetraenal
Traditional Name11-cis-retinal
CAS Registry Number564-87-4
SMILESCC1=C(/C=C/C(C)=C/C=C\C(C)=C\C=O)C(C)(C)CCC1
InChI IdentifierInChI=1S/C20H28O/c1-16(8-6-9-17(2)13-15-21)11-12-19-18(3)10-7-14-20(19,4)5/h6,8-9,11-13,15H,7,10,14H2,1-5H3/b9-6-,12-11+,16-8+,17-13+
InChI KeyNCYCYZXNIZJOKI-IOUUIBBYSA-N
CHEBI IDCHEBI:16066
HMDB IDHMDB0002152
Pathways
NameSMPDB/PathBank
Retinol Metabolism
Vitamin A Deficiency
StateNot Available
Water Solubility4.20e-03 g/l
logP6.62
logS-4.83
pKa (Strongest Acidic)Not Available
pKa (Strongest Basic)-4.06
Hydrogen Acceptor Count1
Hydrogen Donor Count0
Polar Surface Area17.07 Ų
Rotatable Bond Count5
Physiological Charge0
Formal Charge0
Refractivity96.87 m³·mol⁻¹
Polarizability34.94

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