Showing Metabocard for D-ribulose 5-phosphate (BASm0003211)

Common NameD-ribulose 5-phosphate
DescriptionD-Ribulose 5-phosphate is a metabolite in the following pathways: pentose phosphate pathway, pentose and glucuronate interconversions, and riboflavin metabolism (KEGG).
Structure
Molecular FormulaC5H11O8P
Average Mass230.10980
Monoisotopic Mass230.01915
IUPAC Name{[(2S,3R,4S)-3,4,5-trihydroxyoxolan-2-yl]methoxy}phosphonic acid
Traditional Name[(2s,3r,4s)-3,4,5-trihydroxyoxolan-2-yl]methoxyphosphonic acid
CAS Registry Number4151-19-3
SMILESO=C(CO)[C@H](O)[C@H](O)COP(=O)([O-])[O-]
InChI IdentifierInChI=1S/C5H11O8P/c6-1-3(7)5(9)4(8)2-13-14(10,11)12/h4-6,8-9H,1-2H2,(H2,10,11,12)/t4-,5+/m1/s1
InChI KeyFNZLKVNUWIIPSJ-UHNVWZDZSA-N
CHEBI IDCHEBI:58121
HMDB IDHMDB0000618
Pathways
NameSMPDB/PathBank
pentose phosphate pathway
Glucose-6-phosphate dehydrogenase deficiency
Ribose-5-phosphate isomerase deficiency
Transaldolase deficiency
Warburg Effect
StateSolid
Water Solubility3.36e+01 g/l
logP-2.07
logS-0.84
pKa (Strongest Acidic)1.22
pKa (Strongest Basic)-3.68
Hydrogen Acceptor Count7
Hydrogen Donor Count5
Polar Surface Area136.68 Ų
Rotatable Bond Count3
Physiological Charge-2
Formal Charge0
Refractivity40.83 m³·mol⁻¹
Polarizability18.23

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